RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g40540.1 View Network Show in Genome Browser |
| Other Names | Os10g0552900 |
| Description | enoyl-CoA hydratase/isomerase family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 21700721-21704799 Nucleotide Length: 1137 |
| Protein-coding | LOC_Os10g40540 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g46372 LOC_Os05g45300 LOC_Os01g50820 LOC_Os07g09060 LOC_Os08g40610 LOC_Os08g27090 LOC_Os07g20150 LOC_Os03g55930 LOC_Os02g24612 LOC_Os09g32274 LOC_Os08g45040 More.. |
| Downstream Genes | LOC_Os12g10580 LOC_Os12g34550 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00410 rn00640 rn01100 rn00280 |
| Metacyc Pathways | VALDEG-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g40540.1 |
| Rice Genome Annotation | LOC_Os10g40540.1 |
| Ricechip | LOC_Os10g40540.1 |
| KEGG | osa:4349332 dosa:Os10t0552900-01 |
| Entrez-Gene | 4349332 |