RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g40590.1 View Network Show in Genome Browser |
| Other Names | Os10g0554100 |
| Description | oxysterol-binding protein, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 21749421-21754862 Nucleotide Length: 2229 |
| Protein-coding | LOC_Os10g40590 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0008289 | lipid binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os08g37874 LOC_Os08g05890 LOC_Os08g06020 LOC_Os03g18160 LOC_Os01g03070 LOC_Os10g29470 LOC_Os03g40110 LOC_Os08g40590 LOC_Os03g49770 LOC_Os03g57210 LOC_Os04g45190 More.. |
| Downstream Genes | LOC_Os11g43640 LOC_Os12g34510 LOC_Os12g40780 LOC_Os11g32960 LOC_Os11g34860 LOC_Os12g35710 LOC_Os10g42490 LOC_Os10g43040 LOC_Os11g31640 LOC_Os12g40770 LOC_Os12g25120 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g40590.1 |
| Rice Genome Annotation | LOC_Os10g40590.1 |
| Ricechip | LOC_Os10g40590.1 |
| KEGG | osa:4349338 dosa:Os10t0554100-01 |
| Entrez-Gene | 4349338 |