RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g41030.3 View Network Show in Genome Browser |
| Other Names | Os10g0559700,Os10g0559600 |
| Description | agenet domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 22027295-22036252 Nucleotide Length: 5052 |
| Protein-coding | LOC_Os10g41030 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g49290 LOC_Os05g04860 LOC_Os05g09620 LOC_Os01g61930 LOC_Os03g11200 LOC_Os04g40420 LOC_Os03g06950 LOC_Os04g18010 LOC_Os01g52010 |
| Downstream Genes | LOC_Os11g28360 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR172a osa-miR172d-3p |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g41030.3 |
| Rice Genome Annotation | LOC_Os10g41030.3 |
| Ricechip | LOC_Os10g41030.3 |
| KEGG | osa:4349371 osa:4349370 dosa:Os10t0559700-02dosa:Os10t0559600-01 |
| Entrez-Gene | 4349371 |