RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g41110.1 View Network Show in Genome Browser |
| Other Names | Os10g0560450 |
| Description | autophagy-related protein 3, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 22079765-22083319 Nucleotide Length: 642 |
| Protein-coding | LOC_Os10g41110 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g41990 LOC_Os01g42850 LOC_Os04g53240 LOC_Os07g32800 LOC_Os08g09240 LOC_Os06g10340 LOC_Os02g05870 LOC_Os03g47949 LOC_Os09g31130 LOC_Os03g47780 LOC_Os09g27210 More.. |
| Downstream Genes | LOC_Os12g32210 LOC_Os12g06890 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g41110.1 |
| Rice Genome Annotation | LOC_Os10g41110.1 |
| Ricechip | LOC_Os10g41110.1 |
| KEGG | osa:9270245 dosa:Os10t0560450-01 |
| Entrez-Gene | 9270245 |