RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g41170.1 View Network Show in Genome Browser |
| Other Names | Os10g0561100 |
| Description | dehydrogenase, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 22117136-22120221 Nucleotide Length: 996 |
| Protein-coding | LOC_Os10g41170 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0030154 | cell differentiation | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g57520 LOC_Os08g43190 LOC_Os10g29470 LOC_Os02g41550 LOC_Os07g05570 LOC_Os07g30300 LOC_Os08g36320 LOC_Os03g51080 LOC_Os08g36530 LOC_Os01g56930 LOC_Os02g32660 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR6249a osa-miR6249b |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g41170.1 |
| Rice Genome Annotation | LOC_Os10g41170.1 |
| Ricechip | LOC_Os10g41170.1 |
| KEGG | osa:4349382 dosa:Os10t0561100-01 |
| Entrez-Gene | 4349382 |