RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g41410.2 View Network Show in Genome Browser |
| Other Names | Os10g0563700 |
| Description | nucleoside diphosphate kinase, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 22257913-22260438 Nucleotide Length: 456 |
| Protein-coding | LOC_Os10g41410 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005777 | peroxisome | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g59990 LOC_Os07g42450 LOC_Os09g32976 LOC_Os08g23710 LOC_Os03g40180 LOC_Os08g02410 LOC_Os05g41110 LOC_Os05g40820 LOC_Os01g61814 LOC_Os01g49290 LOC_Os01g54870 More.. |
| Downstream Genes | LOC_Os12g38000 LOC_Os12g07010 LOC_Os11g06750 LOC_Os10g41470 LOC_Os11g04070 LOC_Os12g03880 LOC_Os12g05430 LOC_Os11g41610 LOC_Os11g11390 LOC_Os11g03400 LOC_Os12g03090 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g41410.2 |
| Rice Genome Annotation | LOC_Os10g41410.2 |
| Ricechip | LOC_Os10g41410.2 |
| KEGG | osa:4349403 dosa:Os10t0563700-01 |
| Entrez-Gene | 4349403 |