RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g41550.1 View Network Show in Genome Browser |
| Other Names | Os10g0565200 |
| Description | beta-amylase, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 22324198-22327665 Nucleotide Length: 1635 |
| Protein-coding | LOC_Os10g41550 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os10g35670 LOC_Os03g09930 LOC_Os09g34250 LOC_Os09g34214 LOC_Os04g33940 LOC_Os02g02320 LOC_Os05g33730 LOC_Os02g54624 LOC_Os03g31490 LOC_Os04g45490 LOC_Os05g02130 More.. |
| Downstream Genes | LOC_Os12g42850 LOC_Os12g15590 LOC_Os12g01360 LOC_Os11g01330 |
| Pathways | |
|---|---|
| KEGG Pathways | rn01100 rn00500 |
| Metacyc Pathways | PWY-842 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g41550.1 |
| Rice Genome Annotation | LOC_Os10g41550.1 |
| Ricechip | LOC_Os10g41550.1 |
| KEGG | osa:4349417 dosa:Os10t0565200-00 |
| Entrez-Gene | 4349417 |