RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g41790.1 View Network Show in Genome Browser |
| Other Names | Os10g0567500 |
| Description | type II intron maturase protein, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 22489253-22492227 Nucleotide Length: 2202 |
| Protein-coding | LOC_Os10g41790 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g32580 LOC_Os01g65220 LOC_Os03g06190 LOC_Os07g03230 LOC_Os02g06500 |
| Downstream Genes | LOC_Os12g21870 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g41790.1 |
| Rice Genome Annotation | LOC_Os10g41790.1 |
| Ricechip | LOC_Os10g41790.1 |
| KEGG | osa:4349434 dosa:Os10t0567500-01 |
| Entrez-Gene | 4349434 |