RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g42090.2 View Network Show in Genome Browser |
| Other Names | Os10g0571100 |
| Description | AGAP003819-PA, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 22636085-22640106 Nucleotide Length: 366 |
| Protein-coding | LOC_Os10g42090 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g36810 LOC_Os06g01470 LOC_Os09g26380 LOC_Os03g08530 LOC_Os02g19970 LOC_Os07g01760 LOC_Os10g25130 LOC_Os07g42600 LOC_Os02g20360 LOC_Os06g23684 LOC_Os10g25140 More.. |
| Downstream Genes | LOC_Os11g42510 LOC_Os11g35040 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR164e |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g42090.2 |
| Rice Genome Annotation | LOC_Os10g42090.2 |
| Ricechip | LOC_Os10g42090.2 |
| KEGG | osa:4349453 dosa:Os10t0571100-01 |
| Entrez-Gene | 4349453 |