RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g42230.3 View Network Show in Genome Browser |
| Other Names | Os10g0572900 |
| Description | AT hook motif domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 22741637-22745840 Nucleotide Length: 603 |
| Protein-coding | LOC_Os10g42230 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g58960 LOC_Os02g47150 LOC_Os03g02290 LOC_Os08g40170 LOC_Os03g22040 LOC_Os04g38570 |
| Downstream Genes | LOC_Os12g41230 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR810a |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g42230.3 |
| Rice Genome Annotation | LOC_Os10g42230.3 |
| Ricechip | LOC_Os10g42230.3 |
| KEGG | osa:4349469 dosa:Os10t0572900-02 |
| Entrez-Gene | 4349469 |