RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g42250.2 View Network Show in Genome Browser |
| Other Names | Os10g0573100 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 22754137-22756634 Nucleotide Length: 654 |
| Protein-coding | LOC_Os10g42250 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g26814 LOC_Os08g36320 LOC_Os03g51080 LOC_Os01g12800 LOC_Os08g20270 LOC_Os03g13300 LOC_Os01g62870 LOC_Os04g37460 LOC_Os01g62860 LOC_Os06g12580 LOC_Os09g10820 More.. |
| Downstream Genes | LOC_Os12g12580 LOC_Os11g08300 LOC_Os11g29400 LOC_Os12g12590 LOC_Os12g12470 LOC_Os12g12560 LOC_Os11g17610 LOC_Os11g14910 LOC_Os12g12514 LOC_Os12g43700 LOC_Os12g01160 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g42250.2 |
| Rice Genome Annotation | LOC_Os10g42250.2 |
| Ricechip | LOC_Os10g42250.2 |
| KEGG | osa:4349471 dosa:Os10t0573100-01 |
| Entrez-Gene | 4349471 |