RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g42400.1 View Network Show in Genome Browser |
| Other Names | Os10g0574500 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 22819218-22823915 Nucleotide Length: 1812 |
| Protein-coding | LOC_Os10g42400 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g48060 LOC_Os02g53500 |
| Downstream Genes | LOC_Os12g07720 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR3979-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g42400.1 |
| Rice Genome Annotation | LOC_Os10g42400.1 |
| Ricechip | LOC_Os10g42400.1 |
| KEGG | osa:4349480 dosa:Os10t0574500-00 |
| Entrez-Gene | 4349480 |