RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g42420.1 View Network Show in Genome Browser |
| Other Names | Os10g0574800 |
| Description | GTPase-activating protein, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 22836663-22840743 Nucleotide Length: 1224 |
| Protein-coding | LOC_Os10g42420 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0030234 | enzyme regulator activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g10150 LOC_Os01g17430 LOC_Os03g12590 LOC_Os02g11830 LOC_Os03g17020 LOC_Os08g15040 LOC_Os06g05180 LOC_Os02g11820 LOC_Os05g41060 LOC_Os03g50350 LOC_Os03g50340 More.. |
| Downstream Genes | LOC_Os11g07280 LOC_Os12g42850 LOC_Os12g04440 LOC_Os11g04670 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g42420.1 |
| Rice Genome Annotation | LOC_Os10g42420.1 |
| Ricechip | LOC_Os10g42420.1 |
| KEGG | osa:4349482 dosa:Os10t0574800-01 |
| Entrez-Gene | 4349482 |