RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g42430.1 View Network Show in Genome Browser |
| Other Names | Os10g0575000 |
| Description | transcription factor MYC7E, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 22857123-22859886 Nucleotide Length: 2256 |
| Protein-coding | LOC_Os10g42430 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0019748 | secondary metabolic process | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g63940 LOC_Os03g28940 LOC_Os07g42370 LOC_Os02g24612 LOC_Os02g57070 LOC_Os04g13470 LOC_Os04g10750 LOC_Os05g05560 LOC_Os04g10690 LOC_Os07g29360 LOC_Os10g30790 More.. |
| Downstream Genes | LOC_Os12g10580 LOC_Os12g34550 LOC_Os12g37560 LOC_Os12g35030 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g42430.1 |
| Rice Genome Annotation | LOC_Os10g42430.1 |
| Ricechip | LOC_Os10g42430.1 |
| KEGG | osa:4349484 dosa:Os10t0575000-01 |
| Entrez-Gene | 4349484 |