RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g42540.1 View Network Show in Genome Browser |
| Other Names | Os10g0576000 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 22938955-22941077 Nucleotide Length: 318 |
| Protein-coding | LOC_Os10g42540 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os08g02080 LOC_Os02g57180 LOC_Os06g40450 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1846d-3p |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY-4302 PWY-3781 AERESPDON-PWY ANARESPDON-PWY PWY-5083 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g42540.1 |
| Rice Genome Annotation | LOC_Os10g42540.1 |
| Ricechip | LOC_Os10g42540.1 |
| KEGG | osa:4349491 dosa:Os10t0576000-01 |
| Entrez-Gene | 4349491 |