RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g42550.1 View Network Show in Genome Browser |
| Other Names | Os10g0576100 |
| Description | Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 22943495-22945212 Nucleotide Length: 1029 |
| Protein-coding | LOC_Os10g42550 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g05980 |
| Downstream Genes | LOC_Os11g38959 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00562 rn01100 |
| Metacyc Pathways | PWY-6362 PWY-6554 PWY-6366 PWY-6365 |
| Reference | |
|---|---|
| PubMed | 22038091 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g42550.1 |
| Rice Genome Annotation | LOC_Os10g42550.1 |
| Ricechip | LOC_Os10g42550.1 |
| KEGG | osa:4349492 dosa:Os10t0576100-01 |
| Entrez-Gene | 4349492 |