RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g42720.1 View Network Show in Genome Browser |
| Other Names | Os10g0577900 |
| Description | acyltransferase, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 23044693-23050740 Nucleotide Length: 1284 |
| Protein-coding | LOC_Os10g42720 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os10g35390 LOC_Os07g34730 LOC_Os05g38350 LOC_Os01g63580 LOC_Os01g57360 LOC_Os01g44069 LOC_Os06g49790 LOC_Os05g28960 LOC_Os04g57150 LOC_Os08g02060 LOC_Os01g12400 More.. |
| Downstream Genes | LOC_Os11g45400 LOC_Os11g41900 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00561 rn00564 rn01100 |
| Metacyc Pathways | PHOSLIPSYN-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g42720.1 |
| Rice Genome Annotation | LOC_Os10g42720.1 |
| Ricechip | LOC_Os10g42720.1 |
| KEGG | osa:4349502 dosa:Os10t0577900-01 |
| Entrez-Gene | 4349502 |