RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g42750.1 View Network Show in Genome Browser |
| Other Names | Os10g0578200 |
| Description | CSLD1 - cellulose synthase-like family D, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 23062454-23066292 Nucleotide Length: 3384 |
| Protein-coding | LOC_Os10g42750 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Pathways | |
|---|---|
| KEGG Pathways | rn00563 rn01100 |
| Metacyc Pathways | PWY-5338 PWY-2901 PWY-2881 PWY-2902 |
| Reference | |
|---|---|
| PubMed | 17259288 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g42750.1 |
| Rice Genome Annotation | LOC_Os10g42750.1 |
| Ricechip | LOC_Os10g42750.1 |
| KEGG | osa:4349505 dosa:Os10t0578200-01 |
| Entrez-Gene | 4349505 |