RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os10g42840.2 View Network Show in Genome Browser |
| Other Names | Os10g0579300 |
| Description | NADH dehydrogenase 1 alpha subcomplex subunit 12, putative, expressed |
| Gene Attributes | Chromosome: Chr10 CDS Coordinates (5'-3'): 23101958-23103301 Nucleotide Length: 354 |
| Protein-coding | LOC_Os10g42840 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g43850 LOC_Os03g19890 LOC_Os03g50540 LOC_Os01g49190 LOC_Os05g31290 LOC_Os09g08910 LOC_Os10g17280 LOC_Os01g46070 LOC_Os03g18420 LOC_Os02g57180 LOC_Os01g22520 More.. |
| Downstream Genes | LOC_Os11g48040 LOC_Os11g33240 LOC_Os12g37419 LOC_Os12g43630 LOC_Os11g06890 LOC_Os12g10200 |
| Database Links | |
|---|---|
| Gramene | LOC_Os10g42840.2 |
| Rice Genome Annotation | LOC_Os10g42840.2 |
| Ricechip | LOC_Os10g42840.2 |
| KEGG | osa:4349513 dosa:Os10t0579300-01 |
| Entrez-Gene | 4349513 |