RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g01074.3 View Network Show in Genome Browser |
| Other Names | Os11g0101200 |
| Description | RNase P subunit p30, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 38051-44608 Nucleotide Length: 2121 |
| Protein-coding | LOC_Os11g01074 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0004518 | nuclease activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g29470 LOC_Os07g22950 LOC_Os02g49360 LOC_Os05g39530 LOC_Os04g52850 LOC_Os03g08440 LOC_Os02g24612 LOC_Os07g42450 LOC_Os06g19680 LOC_Os04g58350 LOC_Os06g13050 More.. |
| Downstream Genes | LOC_Os11g45250 LOC_Os12g01080 LOC_Os12g01060 LOC_Os11g05570 LOC_Os12g31380 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5161 osa-miR2055 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g01074.3 |
| Rice Genome Annotation | LOC_Os11g01074.3 |
| Ricechip | LOC_Os11g01074.3 |
| KEGG | osa:4349529 dosa:Os11t0101200-01 |
| Entrez-Gene | 4349529 |