RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g01300.1 View Network Show in Genome Browser |
| Other Names | Os11g0104050 |
| Description | protein transport protein Sec61 subunit beta, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 162282-163473 Nucleotide Length: 324 |
| Protein-coding | LOC_Os11g01300 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g74170 LOC_Os04g24180 LOC_Os06g44374 LOC_Os02g08180 LOC_Os07g39400 LOC_Os01g37030 LOC_Os04g49530 |
| Downstream Genes | LOC_Os12g32950 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g01300.1 |
| Rice Genome Annotation | LOC_Os11g01300.1 |
| Ricechip | LOC_Os11g01300.1 |
| KEGG | dosa:Os11t0104050-01 |