RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g01380.1 View Network Show in Genome Browser |
| Other Names | Os11g0104933,Os11g0104866,Os11g0104900 |
| Description | clathrin heavy chain, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 234172-244462 Nucleotide Length: 5127 |
| Protein-coding | LOC_Os11g01380 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g55860 LOC_Os06g07090 LOC_Os04g11880 LOC_Os04g31390 LOC_Os07g08729 LOC_Os03g23950 LOC_Os01g12880 LOC_Os09g25314 LOC_Os05g48930 LOC_Os08g08060 LOC_Os01g08560 More.. |
| Downstream Genes | LOC_Os12g01390 LOC_Os11g02110 LOC_Os12g02070 LOC_Os11g45590 LOC_Os12g22760 LOC_Os11g41820 LOC_Os11g10100 LOC_Os12g10560 LOC_Os11g43640 LOC_Os12g39340 LOC_Os12g12860 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g01380.1 |
| Rice Genome Annotation | LOC_Os11g01380.1 |
| Ricechip | LOC_Os11g01380.1 |
| KEGG | osa:4349546 dosa:Os11t0104866-00dosa:Os11t0104900-00 |