RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g01439.1 View Network Show in Genome Browser |
| Other Names | Os11g0105750 |
| Description | chloroplast unusual positioning protein, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 256827-261737 Nucleotide Length: 2793 |
| Protein-coding | LOC_Os11g01439 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os09g33520 LOC_Os08g42420 LOC_Os03g31490 LOC_Os04g31340 LOC_Os01g01160 LOC_Os02g16680 LOC_Os01g12810 LOC_Os03g41080 LOC_Os01g68330 LOC_Os04g53740 LOC_Os08g30930 More.. |
| Downstream Genes | LOC_Os11g47730 LOC_Os12g42550 LOC_Os11g44810 LOC_Os12g43660 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1857-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g01439.1 |
| Rice Genome Annotation | LOC_Os11g01439.1 |
| Ricechip | LOC_Os11g01439.1 |
| KEGG | osa:9270397 dosa:Os11t0105750-01 |
| Entrez-Gene | 9270397 |