RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g01510.2 View Network Show in Genome Browser |
| Other Names | Os11g0106400 |
| Description | ubiquitin-activating enzyme, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 295653-301609 Nucleotide Length: 3147 |
| Protein-coding | LOC_Os11g01510 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g42850 LOC_Os07g39780 LOC_Os06g14040 LOC_Os09g27420 LOC_Os03g06200 LOC_Os07g22950 LOC_Os03g60550 LOC_Os03g55620 LOC_Os08g44770 LOC_Os06g37440 LOC_Os02g12794 More.. |
| Downstream Genes | LOC_Os11g48080 LOC_Os11g20384 LOC_Os11g43900 LOC_Os11g29380 LOC_Os12g17080 LOC_Os12g13950 LOC_Os12g32240 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g01510.2 |
| Rice Genome Annotation | LOC_Os11g01510.2 |
| Ricechip | LOC_Os11g01510.2 |
| KEGG | osa:4349557 dosa:Os11t0106400-01 |
| Entrez-Gene | 4349557 |