RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g01790.1 View Network Show in Genome Browser |
| Other Names | Os11g0109000 |
| Description | protein phosphatase 2c, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 422275-425470 Nucleotide Length: 1263 |
| Protein-coding | LOC_Os11g01790 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g45310 LOC_Os03g59300 LOC_Os04g40730 LOC_Os01g39830 LOC_Os09g19930 LOC_Os01g71474 LOC_Os05g28520 LOC_Os07g38060 LOC_Os07g38590 LOC_Os03g03164 LOC_Os02g58720 More.. |
| Downstream Genes | LOC_Os12g38400 LOC_Os11g26190 LOC_Os11g30560 LOC_Os11g02350 LOC_Os12g38360 LOC_Os11g30360 LOC_Os12g03150 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5499 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g01790.1 |
| Rice Genome Annotation | LOC_Os11g01790.1 |
| Ricechip | LOC_Os11g01790.1 |
| KEGG | osa:4349568 dosa:Os11t0109000-01 |
| Entrez-Gene | 4349568 |