RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g01869.1 View Network Show in Genome Browser |
| Other Names | Os11g0109900 |
| Description | double-stranded RNA binding motif containing protein, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 457104-461678 Nucleotide Length: 1422 |
| Protein-coding | LOC_Os11g01869 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0040029 | regulation of gene expression, epigenetic | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005654 | nucleoplasm | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os08g10649 LOC_Os03g55640 LOC_Os06g48530 LOC_Os03g02970 LOC_Os05g49220 LOC_Os09g28000 LOC_Os02g16709 LOC_Os02g04050 LOC_Os02g04060 LOC_Os01g67740 LOC_Os02g04040 More.. |
| Downstream Genes | LOC_Os12g44390 LOC_Os11g31900 LOC_Os12g34890 LOC_Os11g05556 LOC_Os11g05552 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR394 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g01869.1 |
| Rice Genome Annotation | LOC_Os11g01869.1 |
| Ricechip | LOC_Os11g01869.1 |
| KEGG | osa:4349575 dosa:Os11t0109900-01 |
| Entrez-Gene | 4349575 |