RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g01980.1 View Network Show in Genome Browser |
| Other Names | Os11g0110800 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 525464-526272 Nucleotide Length: 735 |
| Protein-coding | LOC_Os11g01980 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0008135 | translation factor activity, nucleic acid binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os10g20990 LOC_Os01g14040 LOC_Os04g48370 LOC_Os03g08020 LOC_Os01g59140 LOC_Os03g08050 LOC_Os04g50870 LOC_Os03g08010 LOC_Os04g41040 LOC_Os04g58140 LOC_Os04g20220 More.. |
| Downstream Genes | LOC_Os11g29190 LOC_Os11g04730 LOC_Os12g04510 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g01980.1 |
| Rice Genome Annotation | LOC_Os11g01980.1 |
| Ricechip | LOC_Os11g01980.1 |