RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g03230.3 View Network Show in Genome Browser |
| Other Names | Os11g0125900 |
| Description | nucleoside-triphosphatase, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 1175880-1178216 Nucleotide Length: 393 |
| Protein-coding | LOC_Os11g03230 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009856 | pollination | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os09g02700 LOC_Os04g55960 LOC_Os06g40120 LOC_Os03g61200 LOC_Os07g40580 LOC_Os06g15990 LOC_Os09g32976 LOC_Os08g23710 LOC_Os01g54580 LOC_Os02g49720 LOC_Os04g55210 More.. |
| Downstream Genes | LOC_Os12g03090 LOC_Os11g03400 LOC_Os12g32240 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g03230.3 |
| Rice Genome Annotation | LOC_Os11g03230.3 |
| Ricechip | LOC_Os11g03230.3 |
| KEGG | osa:4349643 dosa:Os11t0125900-00 |
| Entrez-Gene | 4349643 |