RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g03730.1 View Network Show in Genome Browser |
| Other Names | Os11g0131900 |
| Description | alpha-N-arabinofuranosidase A, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 1453502-1460064 Nucleotide Length: 1977 |
| Protein-coding | LOC_Os11g03730 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os10g28120 LOC_Os01g19150 |
| Downstream Genes | LOC_Os12g03470 LOC_Os11g44810 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g03730.1 |
| Rice Genome Annotation | LOC_Os11g03730.1 |
| Ricechip | LOC_Os11g03730.1 |
| KEGG | osa:4349683 dosa:Os11t0131900-01 |
| Entrez-Gene | 4349683 |