RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g03890.1 View Network Show in Genome Browser |
| Other Names | Os11g0133600 |
| Description | RNA recognition motif containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 1551979-1554324 Nucleotide Length: 897 |
| Protein-coding | LOC_Os11g03890 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g17010 LOC_Os03g22570 LOC_Os08g37960 LOC_Os02g01740 LOC_Os02g12850 LOC_Os02g05310 LOC_Os02g39890 LOC_Os10g34380 LOC_Os01g36570 LOC_Os05g49890 LOC_Os02g07070 More.. |
| Downstream Genes | LOC_Os12g08260 LOC_Os12g44390 LOC_Os11g43620 LOC_Os12g18880 LOC_Os11g08940 LOC_Os11g41820 LOC_Os11g14430 LOC_Os12g37370 LOC_Os11g10100 LOC_Os12g07720 LOC_Os11g40150 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g03890.1 |
| Rice Genome Annotation | LOC_Os11g03890.1 |
| Ricechip | LOC_Os11g03890.1 |
| KEGG | osa:4349693 dosa:Os11t0133600-01 |
| Entrez-Gene | 4349693 |