RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g03970.1 View Network Show in Genome Browser |
| Other Names | Os11g0134300,Os11g0134232 |
| Description | CAMK_KIN1/SNF1/Nim1_like.5 - CAMK includes calcium/calmodulin depedent protein kinases, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 1603696-1609154 Nucleotide Length: 1365 |
| Protein-coding | LOC_Os11g03970 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g48300 LOC_Os02g05630 LOC_Os02g55560 LOC_Os06g33530 LOC_Os04g56450 LOC_Os07g32380 LOC_Os04g37904 LOC_Os10g39540 LOC_Os02g15594 LOC_Os06g33549 LOC_Os04g52000 More.. |
| Downstream Genes | LOC_Os12g40510 LOC_Os11g13820 LOC_Os12g33100 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g03970.1 |
| Rice Genome Annotation | LOC_Os11g03970.1 |
| Ricechip | LOC_Os11g03970.1 |
| KEGG | osa:4349698 dosa:Os11t0134300-01 |
| Entrez-Gene | 4349698 |