RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g04020.1 View Network Show in Genome Browser |
| Other Names | Os11g0134900 |
| Description | major facilitator superfamily antiporter, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 1618494-1623978 Nucleotide Length: 1422 |
| Protein-coding | LOC_Os11g04020 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g37420 LOC_Os02g48390 LOC_Os05g50280 LOC_Os07g05640 LOC_Os05g49270 LOC_Os05g49260 LOC_Os08g20570 LOC_Os01g65500 LOC_Os07g37510 LOC_Os04g53930 LOC_Os02g35190 More.. |
| Downstream Genes | LOC_Os11g29370 LOC_Os11g05390 LOC_Os11g42430 LOC_Os12g25200 LOC_Os12g38270 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g04020.1 |
| Rice Genome Annotation | LOC_Os11g04020.1 |
| Ricechip | LOC_Os11g04020.1 |
| KEGG | osa:4349704 dosa:Os11t0134900-01 |
| Entrez-Gene | 4349704 |