RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g04180.1 View Network Show in Genome Browser |
| Other Names | Os11g0136800 |
| Description | dual specificity protein phosphatase, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 1696427-1699220 Nucleotide Length: 1071 |
| Protein-coding | LOC_Os11g04180 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os09g19560 LOC_Os07g12320 LOC_Os03g49210 LOC_Os07g47420 LOC_Os05g01990 LOC_Os05g51490 LOC_Os01g40340 LOC_Os03g44530 LOC_Os05g44320 LOC_Os03g55330 LOC_Os01g27730 More.. |
| Downstream Genes | LOC_Os12g21890 LOC_Os12g42370 LOC_Os12g03990 LOC_Os12g07590 LOC_Os12g02120 LOC_Os12g43100 LOC_Os12g09280 LOC_Os12g01690 LOC_Os12g06620 LOC_Os12g36950 LOC_Os12g25710 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g04180.1 |
| Rice Genome Annotation | LOC_Os11g04180.1 |
| Ricechip | LOC_Os11g04180.1 |
| KEGG | osa:4349715 dosa:Os11t0136800-02 |
| Entrez-Gene | 4349715 |