RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g04230.1 View Network Show in Genome Browser |
| Other Names | Os11g0137400 |
| Description | transcription initiation factor, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 1739120-1741886 Nucleotide Length: 969 |
| Protein-coding | LOC_Os11g04230 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| GO:0005654 | nucleoplasm | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g52940 LOC_Os08g25060 LOC_Os09g02284 LOC_Os02g03340 LOC_Os10g10990 LOC_Os03g01230 LOC_Os04g25550 LOC_Os04g42990 LOC_Os03g53190 LOC_Os10g27050 LOC_Os03g06670 More.. |
| Downstream Genes | LOC_Os12g37370 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g04230.1 |
| Rice Genome Annotation | LOC_Os11g04230.1 |
| Ricechip | LOC_Os11g04230.1 |
| KEGG | dosa:Os11t0137400-00 |