RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g04490.1 View Network Show in Genome Browser |
| Other Names | Os11g0140700 |
| Description | astaxanthin synthase KC28, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 1879360-1881945 Nucleotide Length: 1014 |
| Protein-coding | LOC_Os11g04490 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g31680 LOC_Os04g34460 LOC_Os05g33520 |
| Downstream Genes | LOC_Os12g04260 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00400 rn01100 rn01110 |
| Metacyc Pathways | ARO-PWY PWY-2582 LYSINE-DEG1-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g04490.1 |
| Rice Genome Annotation | LOC_Os11g04490.1 |
| Ricechip | LOC_Os11g04490.1 |
| KEGG | osa:9271908 dosa:Os11t0140700-02 |
| Entrez-Gene | 9271908 |