RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g04520.1 View Network Show in Genome Browser |
| Other Names | Os11g0141000 |
| Description | PP2A regulatory subunit TAP46, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 1894738-1898893 Nucleotide Length: 1257 |
| Protein-coding | LOC_Os11g04520 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0030234 | enzyme regulator activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g49690 LOC_Os01g25610 LOC_Os02g01560 LOC_Os07g40460 LOC_Os01g27630 LOC_Os10g27050 LOC_Os09g11230 LOC_Os05g30530 LOC_Os03g07150 LOC_Os03g55270 LOC_Os01g27390 More.. |
| Downstream Genes | LOC_Os11g11390 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR530-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g04520.1 |
| Rice Genome Annotation | LOC_Os11g04520.1 |
| Ricechip | LOC_Os11g04520.1 |
| KEGG | osa:4349739 dosa:Os11t0141000-02 |
| Entrez-Gene | 4349739 |