RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g04730.1 View Network Show in Genome Browser |
| Other Names | Os11g0143400 |
| Description | DNA-directed RNA polymerases I, II, and III subunit RPABC1, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 2015276-2017823 Nucleotide Length: 684 |
| Protein-coding | LOC_Os11g04730 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g44484 LOC_Os05g05860 LOC_Os04g41490 LOC_Os10g35290 LOC_Os08g07480 LOC_Os04g54840 LOC_Os03g28960 LOC_Os02g05880 LOC_Os01g73430 LOC_Os06g40950 LOC_Os04g48370 More.. |
| Downstream Genes | LOC_Os12g01710 LOC_Os11g29190 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g04730.1 |
| Rice Genome Annotation | LOC_Os11g04730.1 |
| Ricechip | LOC_Os11g04730.1 |
| KEGG | osa:4349748 dosa:Os11t0143400-00 |
| Entrez-Gene | 4349748 |