RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g04890.1 View Network Show in Genome Browser |
| Other Names | Os11g0145700 |
| Description | ASH-like SPRY domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 2077564-2080094 Nucleotide Length: 1488 |
| Protein-coding | LOC_Os11g04890 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0003682 | chromatin binding | Molecular Function | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0005654 | nucleoplasm | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g35070 LOC_Os01g52720 LOC_Os03g10990 LOC_Os01g01960 LOC_Os05g01020 LOC_Os03g51550 LOC_Os04g28040 LOC_Os10g41340 |
| Downstream Genes | LOC_Os11g04930 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g04890.1 |
| Rice Genome Annotation | LOC_Os11g04890.1 |
| Ricechip | LOC_Os11g04890.1 |
| KEGG | dosa:Os11t0145700-00 |