RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os11g04954.1 View Network Show in Genome Browser
Other Names	Os11g0146800
Description	DNA repair protein Rad51, putative, expressed
Gene Attributes	Chromosome: Chr11 CDS Coordinates (5'-3'): 2120107-2124411 Nucleotide Length: 1035
Protein-coding	LOC_Os11g04954

Gene Ontology Classification
GO	Name	Type	Code
GO:0009056	catabolic process	Biological Process	IEA
GO:0007049	cell cycle	Biological Process	IEA
GO:0016043	cellular component organization	Biological Process	IEA
GO:0006259	DNA metabolic process	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0006139	nucleobase, nucleoside, nucleotide and nucleic acid metabolic process	Biological Process	IEA
GO:0006950	response to stress	Biological Process	IEA
GO:0003677	DNA binding	Molecular Function	IEA
GO:0016787	hydrolase activity	Molecular Function	IEA
GO:0000166	nucleotide binding	Molecular Function	IEA
GO:0005515	protein binding	Molecular Function	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os04g57230 LOC_Os10g10244 LOC_Os07g15440 LOC_Os06g13660 LOC_Os07g33850 LOC_Os03g54091 LOC_Os10g31950 LOC_Os04g40290 LOC_Os09g10850 LOC_Os04g40830 LOC_Os04g53720 More..
Downstream Genes	LOC_Os11g40150 LOC_Os12g31370 LOC_Os12g19370 LOC_Os11g16580 LOC_Os12g10850 LOC_Os11g25454 LOC_Os11g38650 LOC_Os11g25990 LOC_Os12g37510 LOC_Os12g10910 LOC_Os11g26950 More..

Reference
PubMed	17562186

Database Links
Gramene	LOC_Os11g04954.1
Rice Genome Annotation	LOC_Os11g04954.1
Ricechip	LOC_Os11g04954.1
KEGG	osa:4349763 dosa:Os11t0146800-00
Entrez-Gene	4349763