RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g05050.1 View Network Show in Genome Browser |
| Other Names | Os11g0147800 |
| Description | stem-specific protein TSJT1, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 2204509-2207566 Nucleotide Length: 714 |
| Protein-coding | LOC_Os11g05050 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g12200 LOC_Os07g12170 LOC_Os07g07709 LOC_Os03g58050 LOC_Os07g47640 |
| Downstream Genes | LOC_Os12g23150 LOC_Os12g43600 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g05050.1 |
| Rice Genome Annotation | LOC_Os11g05050.1 |
| Ricechip | LOC_Os11g05050.1 |
| KEGG | osa:4349769 dosa:Os11t0147800-01 |
| Entrez-Gene | 4349769 |