RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g05540.1 View Network Show in Genome Browser |
| Other Names | Os11g0153400 |
| Description | rhoGAP domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 2500432-2505233 Nucleotide Length: 1440 |
| Protein-coding | LOC_Os11g05540 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0030234 | enzyme regulator activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g20850 LOC_Os02g58730 LOC_Os02g02840 LOC_Os10g28660 LOC_Os07g07950 LOC_Os03g46090 LOC_Os02g50860 LOC_Os06g12790 LOC_Os10g36870 LOC_Os04g45670 LOC_Os07g32460 More.. |
| Downstream Genes | LOC_Os12g06670 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR159a.1 osa-miR159b |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g05540.1 |
| Rice Genome Annotation | LOC_Os11g05540.1 |
| Ricechip | LOC_Os11g05540.1 |
| KEGG | osa:4349806 dosa:Os11t0153400-01 |
| Entrez-Gene | 4349806 |