RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g05562.1 View Network Show in Genome Browser |
| Other Names | Os11g0153800 |
| Description | 40S ribosomal protein S25, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 2522183-2528177 Nucleotide Length: 327 |
| Protein-coding | LOC_Os11g05562 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g62350 LOC_Os05g38520 LOC_Os04g28180 LOC_Os04g35090 LOC_Os03g60400 LOC_Os01g61814 LOC_Os05g30530 LOC_Os02g34460 LOC_Os01g59990 LOC_Os07g12250 LOC_Os04g50990 More.. |
| Downstream Genes | LOC_Os11g11390 LOC_Os12g38000 LOC_Os11g29190 LOC_Os12g03090 LOC_Os11g41610 LOC_Os11g24610 LOC_Os12g21798 LOC_Os12g03880 LOC_Os12g32380 LOC_Os11g13540 LOC_Os11g13530 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g05562.1 |
| Rice Genome Annotation | LOC_Os11g05562.1 |
| Ricechip | LOC_Os11g05562.1 |
| KEGG | osa:4349810 dosa:Os11t0153800-01 |
| Entrez-Gene | 4349810 |