RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g06010.1 View Network Show in Genome Browser |
| Other Names | Os11g0158500 |
| Description | helix-loop-helix DNA-binding protein, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 2831601-2837707 Nucleotide Length: 2709 |
| Protein-coding | LOC_Os11g06010 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0030154 | cell differentiation | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os09g24954 LOC_Os07g32730 |
| Downstream Genes | LOC_Os12g39070 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g06010.1 |
| Rice Genome Annotation | LOC_Os11g06010.1 |
| Ricechip | LOC_Os11g06010.1 |
| KEGG | osa:4349836 dosa:Os11t0158500-01 |
| Entrez-Gene | 4349836 |