RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g06410.1 View Network Show in Genome Browser |
| Other Names | Os11g0163500 |
| Description | homeodomain, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 3091513-3096323 Nucleotide Length: 1452 |
| Protein-coding | LOC_Os11g06410 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g28940 |
| Downstream Genes | LOC_Os12g14110 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5809 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g06410.1 |
| Rice Genome Annotation | LOC_Os11g06410.1 |
| Ricechip | LOC_Os11g06410.1 |
| KEGG | osa:4349866 dosa:Os11t0163500-01 |
| Entrez-Gene | 4349866 |