RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g06420.1 View Network Show in Genome Browser |
| Other Names | Os11g0163600 |
| Description | OsFBT13 - F-box and tubby domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 3098464-3102676 Nucleotide Length: 1323 |
| Protein-coding | LOC_Os11g06420 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g56810 LOC_Os06g46000 LOC_Os02g07060 LOC_Os03g01530 LOC_Os01g59150 LOC_Os01g18050 LOC_Os05g34170 LOC_Os03g45920 LOC_Os09g32976 LOC_Os08g23710 LOC_Os01g70010 More.. |
| Downstream Genes | LOC_Os12g06670 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR408-5p osa-miR2919 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g06420.1 |
| Rice Genome Annotation | LOC_Os11g06420.1 |
| Ricechip | LOC_Os11g06420.1 |
| KEGG | osa:4349867 dosa:Os11t0163600-01 |
| Entrez-Gene | 4349867 |