RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g06740.1 View Network Show in Genome Browser |
| Other Names | Os11g0168100 |
| Description | syntaxin 6, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 3290806-3293567 Nucleotide Length: 708 |
| Protein-coding | LOC_Os11g06740 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g02570 LOC_Os02g24134 LOC_Os02g02720 LOC_Os08g17600 LOC_Os03g58840 LOC_Os03g06960 LOC_Os07g09600 LOC_Os03g17990 LOC_Os04g13470 LOC_Os03g30460 LOC_Os01g51120 More.. |
| Downstream Genes | LOC_Os12g05810 LOC_Os12g44250 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g06740.1 |
| Rice Genome Annotation | LOC_Os11g06740.1 |
| Ricechip | LOC_Os11g06740.1 |
| KEGG | osa:4349878 dosa:Os11t0168100-01 |
| Entrez-Gene | 4349878 |