RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g06880.1 View Network Show in Genome Browser |
| Other Names | Os11g0169800 |
| Description | acyl-CoA synthetase, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 3374944-3377966 Nucleotide Length: 1041 |
| Protein-coding | LOC_Os11g06880 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g51170 LOC_Os10g37210 LOC_Os11g04980 LOC_Os08g23810 LOC_Os01g11300 LOC_Os05g25310 LOC_Os02g32490 LOC_Os09g27830 LOC_Os02g01920 LOC_Os01g67040 LOC_Os07g42450 More.. |
| Downstream Genes | LOC_Os12g04990 LOC_Os12g07010 LOC_Os12g07110 |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY-5143 PWY-5136 FAO-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g06880.1 |
| Rice Genome Annotation | LOC_Os11g06880.1 |
| Ricechip | LOC_Os11g06880.1 |
| KEGG | osa:4349889 dosa:Os11t0169800-01 |
| Entrez-Gene | 4349889 |