RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g06900.1 View Network Show in Genome Browser |
| Other Names | Os11g0170000 |
| Description | amidase family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 3382384-3388992 Nucleotide Length: 1956 |
| Protein-coding | LOC_Os11g06900 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g44820 LOC_Os08g04280 LOC_Os02g57120 |
| Downstream Genes | LOC_Os11g34210 |
| Pathways | |
|---|---|
| Metacyc Pathways | P345-PWY ARGDEG-V-PWY PWY6666-1 P344-PWY PWY-3161 PWY-5025 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g06900.1 |
| Rice Genome Annotation | LOC_Os11g06900.1 |
| Ricechip | LOC_Os11g06900.1 |
| KEGG | osa:4349891 dosa:Os11t0170000-01 |
| Entrez-Gene | 4349891 |