RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g07020.5 View Network Show in Genome Browser |
| Other Names | Os11g0171300 |
| Description | fructose-bisphospate aldolase isozyme, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 3488553-3491659 Nucleotide Length: 663 |
| Protein-coding | LOC_Os11g07020 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g40640 LOC_Os04g38600 LOC_Os05g48630 LOC_Os03g03720 LOC_Os04g33830 LOC_Os08g10020 LOC_Os04g16680 LOC_Os07g05480 LOC_Os08g33820 LOC_Os06g15400 LOC_Os03g09220 More.. |
| Downstream Genes | LOC_Os11g47970 LOC_Os11g13890 LOC_Os12g07210 LOC_Os12g19470 LOC_Os12g19381 LOC_Os12g17600 LOC_Os12g38640 LOC_Os12g08760 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g07020.5 |
| Rice Genome Annotation | LOC_Os11g07020.5 |
| Ricechip | LOC_Os11g07020.5 |
| KEGG | osa:4349897 dosa:Os11t0171300-01 |
| Entrez-Gene | 4349897 |