RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g07480.1 View Network Show in Genome Browser |
| Other Names | Os11g0176000 |
| Description | WD domain, G-beta repeat domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 3789341-3793813 Nucleotide Length: 1569 |
| Protein-coding | LOC_Os11g07480 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g54110 LOC_Os02g56130 LOC_Os03g03150 LOC_Os02g53140 LOC_Os03g46650 LOC_Os03g64110 LOC_Os08g01680 LOC_Os02g57220 LOC_Os03g08830 LOC_Os01g74146 LOC_Os06g38470 More.. |
| Downstream Genes | LOC_Os12g42150 LOC_Os11g32900 LOC_Os11g30500 LOC_Os11g08400 LOC_Os12g07110 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g07480.1 |
| Rice Genome Annotation | LOC_Os11g07480.1 |
| Ricechip | LOC_Os11g07480.1 |
| KEGG | osa:4349922 dosa:Os11t0176000-01 |
| Entrez-Gene | 4349922 |